From e2acd5d8603356651dbede214d7a968b5f08fafb Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 21 Jul 2025 09:05:51 -0400
Subject: [PATCH 01/13] python3-Cython: update to 3.1.2.

---
 srcpkgs/python3-Cython/template | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/srcpkgs/python3-Cython/template b/srcpkgs/python3-Cython/template
index 043ba2ab276..62397fb8f59 100644
--- a/srcpkgs/python3-Cython/template
+++ b/srcpkgs/python3-Cython/template
@@ -1,6 +1,6 @@
 # Template file for 'python3-Cython'
 pkgname=python3-Cython
-version=3.0.12
+version=3.1.2
 revision=1
 build_style=python3-module
 hostmakedepends="python3-setuptools"
@@ -12,7 +12,7 @@ license="Apache-2.0"
 homepage="https://cython.org/"
 changelog="https://raw.githubusercontent.com/cython/cython/master/CHANGES.rst"
 distfiles="${PYPI_SITE}/c/cython/cython-${version}.tar.gz"
-checksum=b988bb297ce76c671e28c97d017b95411010f7c77fa6623dd0bb47eed1aee1bc
+checksum=6bbf7a953fa6762dfecdec015e3b054ba51c0121a45ad851fa130f63f5331381
 # Tests are flaky
 make_check=no
 conflicts="python3-Cython0.29>=0"

From ca32e1b054156f9323fe58684365e1e9ca2b2ea9 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 10:20:34 -0400
Subject: [PATCH 02/13] wxPython: update to 4.2.3.

---
 srcpkgs/wxPython/files/no-stacktrace.patch   |  4 +-
 srcpkgs/wxPython/patches/00.python3.12.patch | 11 ++--
 srcpkgs/wxPython/patches/01.python3.12.patch | 38 -------------
 srcpkgs/wxPython/patches/02.python3.12.patch | 57 --------------------
 srcpkgs/wxPython/patches/no-downloads.patch  | 19 +++++++
 srcpkgs/wxPython/patches/wxsvg-cython.patch  | 12 -----
 srcpkgs/wxPython/template                    |  6 +--
 7 files changed, 28 insertions(+), 119 deletions(-)
 delete mode 100644 srcpkgs/wxPython/patches/01.python3.12.patch
 delete mode 100644 srcpkgs/wxPython/patches/02.python3.12.patch
 create mode 100644 srcpkgs/wxPython/patches/no-downloads.patch
 delete mode 100644 srcpkgs/wxPython/patches/wxsvg-cython.patch

diff --git a/srcpkgs/wxPython/files/no-stacktrace.patch b/srcpkgs/wxPython/files/no-stacktrace.patch
index e64548bea8c..8bc8a318bc8 100644
--- a/srcpkgs/wxPython/files/no-stacktrace.patch
+++ b/srcpkgs/wxPython/files/no-stacktrace.patch
@@ -8,8 +8,8 @@ https://git.alpinelinux.org/aports/plain/community/py3-wxpython/no-stacktrace.pa
              PyErr_Clear();
  
              Py_BEGIN_ALLOW_THREADS
--            sipRes = new  ::wxString((sipSelfWasArg ? sipCpp-> ::wxAppTraits::GetAssertStackTrace() : sipCpp->GetAssertStackTrace()));
-+            sipRes = new  ::wxString("");
+-            sipRes = new ::wxString((sipSelfWasArg ? sipCpp->::wxAppTraits::GetAssertStackTrace() : sipCpp->GetAssertStackTrace()));
++            sipRes = new ::wxString("");
              Py_END_ALLOW_THREADS
  
              if (PyErr_Occurred())
diff --git a/srcpkgs/wxPython/patches/00.python3.12.patch b/srcpkgs/wxPython/patches/00.python3.12.patch
index 356e95d38c2..c5101fcfdb5 100644
--- a/srcpkgs/wxPython/patches/00.python3.12.patch
+++ b/srcpkgs/wxPython/patches/00.python3.12.patch
@@ -13,10 +13,10 @@ diff --git a/sip/siplib/siplib.c b/sip/siplib/siplib.c
 index d4003e9f..a52da595 100644
 --- a/sip/siplib/siplib.c
 +++ b/sip/siplib/siplib.c
-@@ -12597,7 +12597,11 @@ static void *sip_api_get_type_user_data(const sipWrapperType *wt)
-  */
- static PyObject *sip_api_py_type_dict(const PyTypeObject *py_type)
- {
+@@ -12592,7 +12592,11 @@
+             "sipPyTypeDictRef() instead",
+             1);
+ 
 +#if PY_VERSION_HEX >= 0x030c0000
 +    return PyType_GetDict(py_type);
 +#else
@@ -25,6 +25,3 @@ index d4003e9f..a52da595 100644
  }
  
  
--- 
-2.40.1
-
diff --git a/srcpkgs/wxPython/patches/01.python3.12.patch b/srcpkgs/wxPython/patches/01.python3.12.patch
deleted file mode 100644
index 12a140ee9c0..00000000000
--- a/srcpkgs/wxPython/patches/01.python3.12.patch
+++ /dev/null
@@ -1,38 +0,0 @@
-https://src.fedoraproject.org/rpms/python-wxpython4/c/46eb04f8ac5674968bfa3def439a67a39301024e
-
-From 9540ec1682a0f12e9634a0f087af8b85af45e547 Mon Sep 17 00:00:00 2001
-From: Phil Thompson <phil@riverbankcomputing.com>
-Date: Mon, 26 Jun 2023 15:04:53 +0200
-Subject: [PATCH] sipMalloc() and sipFree() are now implemented using
- PyMem_RawMalloc() and PyMem_RawFree() so that they should be safe to call
- from functions registered with Py_AtExit().
-
----
- sip/siplib/siplib.c | 4 ++--
- 1 file changed, 2 insertions(+), 2 deletions(-)
-
-diff --git a/sip/siplib/siplib.c b/sip/siplib/siplib.c
-index 95563e5c..d4003e9f 100644
---- a/sip/siplib/siplib.c
-+++ b/sip/siplib/siplib.c
-@@ -2147,7 +2147,7 @@ void *sip_api_malloc(size_t nbytes)
- {
-     void *mem;
- 
--    if ((mem = PyMem_Malloc(nbytes)) == NULL)
-+    if ((mem = PyMem_RawMalloc(nbytes)) == NULL)
-         PyErr_NoMemory();
- 
-     return mem;
-@@ -2159,7 +2159,7 @@ void *sip_api_malloc(size_t nbytes)
-  */
- void sip_api_free(void *mem)
- {
--    PyMem_Free(mem);
-+    PyMem_RawFree(mem);
- }
- 
- 
--- 
-2.40.1
-
diff --git a/srcpkgs/wxPython/patches/02.python3.12.patch b/srcpkgs/wxPython/patches/02.python3.12.patch
deleted file mode 100644
index ae2cd251d5c..00000000000
--- a/srcpkgs/wxPython/patches/02.python3.12.patch
+++ /dev/null
@@ -1,57 +0,0 @@
---- a/wx/lib/docview.py
-+++ b/wx/lib/docview.py
-@@ -1034,7 +1034,7 @@ class DocTemplate(wx.Object):
-         string will be displayed in the file filter list of Windows file
-         selectors.
- 
--        filter is an appropriate file filter such as \*.txt.
-+        filter is an appropriate file filter such as *.txt.
- 
-         dir is the default directory to use for file selectors.
- 
---- a/wx/lib/layoutf.py
-+++ b/wx/lib/layoutf.py
-@@ -132,8 +132,8 @@ class Layoutf(wx.LayoutConstraints):
-              'r': 'wx.Right', 'h': 'wx.Height', 'w': 'wx.Width',
-              'x': 'wx.CentreX', 'y': 'wx.CentreY' }
- 
--    rexp1 = re.compile('^\s*([tlrbhwxy])\s*([!\?\*])\s*(\d*)\s*$')
--    rexp2 = re.compile('^\s*([tlrbhwxy])\s*([=%<>^_])\s*([tlrbhwxy]?)\s*(\d*)\s*#(\d+)\s*$')
-+    rexp1 = re.compile(r'^\s*([tlrbhwxy])\s*([!\?\*])\s*(\d*)\s*$')
-+    rexp2 = re.compile(r'^\s*([tlrbhwxy])\s*([=%<>^_])\s*([tlrbhwxy]?)\s*(\d*)\s*#(\d+)\s*$')
- 
-     def __init__(self,pstr=None,winlist=None):
-         wx.LayoutConstraints.__init__(self)
---- a/wx/lib/wxpTag.py
-+++ b/wx/lib/wxpTag.py
-@@ -45,7 +45,7 @@ The name-value pairs in all the nested P
- strings into a python dictionary and passed to the __init__ method of
- the class as keyword arguments.  This means that they are all
- accessible from the __init__ method as regular parameters, or you use
--the special Python \*\*kw syntax in your __init__ method to get the
-+the special Python **kw syntax in your __init__ method to get the
- dictionary directly.
- 
- Some parameter values are special and if they are present then they will
---- a/wx/tools/pywxrc.py
-+++ b/wx/tools/pywxrc.py
-@@ -521,7 +521,7 @@ class XmlResourceCompiler:
-         # Generate subclasses
-         for subclass in subclasses:
-             windowClass = bases[subclass]
--            subclass = re.sub("^\S+\.", "", subclass)
-+            subclass = re.sub(r"^\S+\.", "", subclass)
-             windowClass = re.sub("^wx", "", windowClass)
-             outputList.append(self.templates.SUBCLASS_HEADER % locals())
-             outputList.append('\n')
-@@ -766,8 +766,8 @@ class XmlResourceCompiler:
-             \n => \\n
-             \r => \\r
-             \t => \\t
--            \ => \\
--            " => \"
-+            \\ => \\\\
-+            " => \\"
- 
-         Returns result as string, which is bytes in py2 or unicode in py3.
-         """
diff --git a/srcpkgs/wxPython/patches/no-downloads.patch b/srcpkgs/wxPython/patches/no-downloads.patch
new file mode 100644
index 00000000000..590558376ae
--- /dev/null
+++ b/srcpkgs/wxPython/patches/no-downloads.patch
@@ -0,0 +1,19 @@
+Disable attempts by the build script to fetch missing tools.
+
+--- a/build.py
++++ b/build.py
+@@ -21,8 +21,12 @@
+ import re
+ import shutil
+ import subprocess
+-import requests
+-from requests.exceptions import HTTPError
++
++#import requests
++#from requests.exceptions import HTTPError
++requests = None
++HTTPError = None
++
+ import traceback
+ from io import BytesIO
+ import bz2
diff --git a/srcpkgs/wxPython/patches/wxsvg-cython.patch b/srcpkgs/wxPython/patches/wxsvg-cython.patch
deleted file mode 100644
index 0876d61c429..00000000000
--- a/srcpkgs/wxPython/patches/wxsvg-cython.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-The only thing preventing use of Cython 3 is an unused, invalid import.
-
---- a/wx/svg/_nanosvg.pyx
-+++ b/wx/svg/_nanosvg.pyx
-@@ -42,7 +42,6 @@
- 
- import sys
- 
--cimport cython.object
- from cpython.buffer cimport (
-     Py_buffer, PyObject_CheckBuffer, PyObject_GetBuffer, PyBUF_SIMPLE,
-     PyBuffer_Release)
diff --git a/srcpkgs/wxPython/template b/srcpkgs/wxPython/template
index 25fbb4fd585..12b8aa4eadb 100644
--- a/srcpkgs/wxPython/template
+++ b/srcpkgs/wxPython/template
@@ -1,7 +1,7 @@
 # Template file for 'wxPython'
 pkgname=wxPython
-version=4.2.1
-revision=6
+version=4.2.3
+revision=1
 build_style=python3-module
 make_build_args="--skip-build"
 make_install_args="--skip-build"
@@ -14,7 +14,7 @@ maintainer="Orphaned <orphan@voidlinux.org>"
 license="custom:wxWindows"
 homepage="http://www.wxpython.org/"
 distfiles="${PYPI_SITE}/w/wxPython/wxPython-${version}.tar.gz"
-checksum=e48de211a6606bf072ec3fa778771d6b746c00b7f4b970eb58728ddf56d13d5c
+checksum=20d6e0c927e27ced85643719bd63e9f7fd501df6e9a8aab1489b039897fd7c01
 
 export WXPYTHON_RELEASE=yes
 if [ "$CROSS_BUILD" ]; then

From 2c1f64cd4d4a8ea0c763a2688fcef5f1fc95e8e3 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 10:23:10 -0400
Subject: [PATCH 03/13] python3-pandas-msgpack: remove package

This package hasn't been updated in the five years since it has been
added, and it requires ever more patching to work with the evolving
Python and Cython ecosystem.
---
 .../patches/python3.12.patch                  | 14 --------------
 srcpkgs/python3-pandas-msgpack/template       | 19 -------------------
 srcpkgs/removed-packages/template             |  1 +
 3 files changed, 1 insertion(+), 33 deletions(-)
 delete mode 100644 srcpkgs/python3-pandas-msgpack/patches/python3.12.patch
 delete mode 100644 srcpkgs/python3-pandas-msgpack/template

diff --git a/srcpkgs/python3-pandas-msgpack/patches/python3.12.patch b/srcpkgs/python3-pandas-msgpack/patches/python3.12.patch
deleted file mode 100644
index 5e9025a5d6f..00000000000
--- a/srcpkgs/python3-pandas-msgpack/patches/python3.12.patch
+++ /dev/null
@@ -1,14 +0,0 @@
---- ./versioneer.py.orig	2023-09-29 10:02:24.403985079 -0400
-+++ ./versioneer.py	2023-09-29 10:02:36.679060444 -0400
-@@ -339,9 +339,9 @@
-     # configparser.NoOptionError (if it lacks "VCS="). See the docstring at
-     # the top of versioneer.py for instructions on writing your setup.cfg .
-     setup_cfg = os.path.join(root, "setup.cfg")
--    parser = configparser.SafeConfigParser()
-+    parser = configparser.ConfigParser()
-     with open(setup_cfg, "r") as f:
--        parser.readfp(f)
-+        parser.read_file(f)
-     VCS = parser.get("versioneer", "VCS")  # mandatory
- 
-     def get(parser, name):
diff --git a/srcpkgs/python3-pandas-msgpack/template b/srcpkgs/python3-pandas-msgpack/template
deleted file mode 100644
index a9bf56b2747..00000000000
--- a/srcpkgs/python3-pandas-msgpack/template
+++ /dev/null
@@ -1,19 +0,0 @@
-# Template file for 'python3-pandas-msgpack'
-pkgname=python3-pandas-msgpack
-version=0.1.5
-revision=7
-build_style=python3-module
-hostmakedepends="python3-setuptools python3-Cython"
-makedepends="python3-devel"
-depends="python3-pandas"
-short_desc="Providing an interface to msgpack from pandas"
-maintainer="Pulux <pulux@pf4sh.de>"
-license="BSD-3-Clause"
-homepage="https://www.pf4sh.eu/git/pulux/pandas-msgpack/"
-distfiles="https://www.pf4sh.eu/git/pulux/pandas-msgpack/archive/${version}.tar.gz"
-checksum=25288bc498cc0f9579c227cf33e20fc41d6d47ef58cc9fde27ede9796a647822
-make_check=no # Tests rely on obsolete pandas features
-
-post_install() {
-	vlicense LICENSE.md
-}
diff --git a/srcpkgs/removed-packages/template b/srcpkgs/removed-packages/template
index 74b404fe9c3..feca6cf2521 100644
--- a/srcpkgs/removed-packages/template
+++ b/srcpkgs/removed-packages/template
@@ -767,6 +767,7 @@ replaces="
  python3-nose-random<=1.0.0_6
  python3-nose<=1.3.7_10
  python3-pafy<=0.5.5_7
+ python3-pandas-msgpack<=0.1.5_7
  python3-pgpdump<=1.5_10
  python3-pyPEG2<=2.15.2_7
  python3-pyenet<=5.15.0_2

From afec9bc59e50c497d489973322465ac4d909e0cd Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 10:25:44 -0400
Subject: [PATCH 04/13] python3-shapely: update to 2.1.1.

---
 srcpkgs/python3-shapely/template | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/srcpkgs/python3-shapely/template b/srcpkgs/python3-shapely/template
index ddc691dfb72..b07cf843ab4 100644
--- a/srcpkgs/python3-shapely/template
+++ b/srcpkgs/python3-shapely/template
@@ -1,19 +1,19 @@
 # Template file for 'python3-shapely'
 pkgname=python3-shapely
-version=2.0.6
+version=2.1.1
 revision=1
 build_style=python3-module
 build_helper=numpy
 hostmakedepends="python3-setuptools python3-Cython geos"
 makedepends="python3-devel python3-numpy geos-devel"
-depends="python3"
+depends="python3-numpy"
 checkdepends="python3-pytest-xdist"
 short_desc="Library for manipulation and analysis of geometric objects for Python3"
 maintainer="Karl Nilsson <karl.robert.nilsson@gmail.com>"
 license="BSD-3-Clause"
 homepage="https://github.com/shapely/shapely"
 distfiles="https://github.com/shapely/shapely/archive/${version}.tar.gz"
-checksum=71f1830bd1aa42d0493c8beb48c2e80712450af43376af4ba3bf40f0d9064120
+checksum=72875ca3b490eff704d91e2aba31f21228ea1fe361d540bd455c6523255992c2
 
 pre_configure() {
 	if [ "$CROSS_BUILD" ]; then

From cfdc2cc058212ddf6a81330e0bca403b972a14f4 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 10:36:23 -0400
Subject: [PATCH 05/13] python3-SQLAlchemy2: update to 2.0.41.

---
 srcpkgs/python3-SQLAlchemy2/template | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/srcpkgs/python3-SQLAlchemy2/template b/srcpkgs/python3-SQLAlchemy2/template
index 9025510d587..bcc64d76522 100644
--- a/srcpkgs/python3-SQLAlchemy2/template
+++ b/srcpkgs/python3-SQLAlchemy2/template
@@ -1,9 +1,8 @@
 # Template file for 'python3-SQLAlchemy2'
 pkgname=python3-SQLAlchemy2
-version=2.0.36
+version=2.0.41
 revision=1
 build_style=python3-pep517
-make_install_target="dist/SQLAlchemy-${version}-*-*-*.whl"
 hostmakedepends="python3-setuptools python3-Cython python3-wheel"
 makedepends="python3-devel"
 depends="python3-greenlet python3-typing_extensions"
@@ -14,7 +13,7 @@ license="MIT"
 homepage="https://www.sqlalchemy.org"
 changelog="https://docs.sqlalchemy.org/en/20/changelog/"
 distfiles="${PYPI_SITE}/s/sqlaLchemy/sqlalchemy-${version}.tar.gz"
-checksum=7f2767680b6d2398aea7082e45a774b2b0767b5c8d8ffb9c8b683088ea9b29c5
+checksum=edba70118c4be3c2b1f90754d308d0b79c6fe2c0fdc52d8ddf603916f83f4db9
 
 conflicts="python3-SQLAlchemy"
 

From c31704473897dbb6b6662bb544c34f4a01750ea2 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 11:15:55 -0400
Subject: [PATCH 06/13] python3-rencode: update to 1.0.8.

---
 .../python3-rencode/patches/no-cflags.patch   | 13 +++++++++++
 srcpkgs/python3-rencode/template              | 22 ++++++++++++++-----
 2 files changed, 30 insertions(+), 5 deletions(-)
 create mode 100644 srcpkgs/python3-rencode/patches/no-cflags.patch

diff --git a/srcpkgs/python3-rencode/patches/no-cflags.patch b/srcpkgs/python3-rencode/patches/no-cflags.patch
new file mode 100644
index 00000000000..a37ed0a2d6c
--- /dev/null
+++ b/srcpkgs/python3-rencode/patches/no-cflags.patch
@@ -0,0 +1,13 @@
+Cf. https://github.com/aresch/rencode/commit/e7ec8ea718e73a8fee7dbc007c262e1584f7f94b
+
+--- a/build.py
++++ b/build.py
+@@ -11,7 +11,7 @@
+ from setuptools.command.build_ext import build_ext
+ 
+ 
+-COMPILE_ARGS = ["-march=native", "-O3", "-msse", "-msse2", "-mfma", "-mfpmath=sse"]
++COMPILE_ARGS = []
+ LINK_ARGS: list[str] = []
+ INCLUDE_DIRS: list[str] = []
+ LIBRARIES: list[str] = []
diff --git a/srcpkgs/python3-rencode/template b/srcpkgs/python3-rencode/template
index 4a11ae39dfe..db23ed44d7e 100644
--- a/srcpkgs/python3-rencode/template
+++ b/srcpkgs/python3-rencode/template
@@ -1,9 +1,9 @@
 # Template file for 'python3-rencode'
 pkgname=python3-rencode
-version=1.0.6
-revision=11
-build_style=python3-module
-hostmakedepends="python3-setuptools python3-Cython python3-wheel"
+version=1.0.8
+revision=1
+build_style=python3-pep517
+hostmakedepends="python3-poetry-core python3-setuptools python3-Cython"
 makedepends="python3-devel"
 depends="python3"
 short_desc="Python3 module for fast (basic) object serialization"
@@ -11,4 +11,16 @@ maintainer="Orphaned <orphan@voidlinux.org>"
 license="GPL-3.0-or-later"
 homepage="https://github.com/aresch/rencode"
 distfiles="${homepage}/archive/v${version}.tar.gz"
-checksum=0ed61111f053ea37511da86ca7aed2a3cfda6bdaa1f54a237c4b86eea52f0733
+checksum=480aab74948a7f339b749b5c39bdb4caf15429f4b49a998c770d5f371098d351
+
+do_build() {
+	pyproject-build --no-isolation --wheel .
+}
+
+do_check() {
+	local testdir="${wrksrc}/.xbps-testdir/$(date +%s)"
+	python3 -m installer --destdir "${testdir}" dist/*.whl
+
+	PATH="${testdir}/usr/bin:${PATH}" PYTHONPATH="${testdir}/${py3_sitelib}" \
+		python3 tests/test_rencode.py
+}

From a41b10e64e1ff55d5e502f4f23d4e1412e2ada2b Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 11:25:31 -0400
Subject: [PATCH 07/13] python3-dbus-fast: update to 2.44.2.

---
 srcpkgs/python3-dbus-fast/patches/cython-3.1.patch | 11 +++++++++++
 srcpkgs/python3-dbus-fast/template                 |  7 ++++---
 2 files changed, 15 insertions(+), 3 deletions(-)
 create mode 100644 srcpkgs/python3-dbus-fast/patches/cython-3.1.patch

diff --git a/srcpkgs/python3-dbus-fast/patches/cython-3.1.patch b/srcpkgs/python3-dbus-fast/patches/cython-3.1.patch
new file mode 100644
index 00000000000..1773e233d13
--- /dev/null
+++ b/srcpkgs/python3-dbus-fast/patches/cython-3.1.patch
@@ -0,0 +1,11 @@
+--- a/pyproject.toml
++++ b/pyproject.toml
+@@ -104,7 +104,7 @@
+ ignore_errors = true
+ 
+ [build-system]
+-requires = ['setuptools>=65.4.1', 'wheel', 'Cython>=3,<3.1.0', "poetry-core>=1.0.0"]
++requires = ['setuptools>=65.4.1', 'wheel', 'Cython>=3,<3.2.0', "poetry-core>=1.0.0"]
+ build-backend = "poetry.core.masonry.api"
+ 
+ [tool.ruff]
diff --git a/srcpkgs/python3-dbus-fast/template b/srcpkgs/python3-dbus-fast/template
index 2d310b3d330..9cd704429eb 100644
--- a/srcpkgs/python3-dbus-fast/template
+++ b/srcpkgs/python3-dbus-fast/template
@@ -1,9 +1,10 @@
 # Template file for 'python3-dbus-fast'
 pkgname=python3-dbus-fast
-version=2.39.3
-revision=3
+version=2.44.2
+revision=1
 build_style=python3-pep517
 hostmakedepends="python3-setuptools python3-wheel python3-poetry-core python3-Cython"
+makedepends="python3-devel"
 depends="python3"
 short_desc="Faster version of dbus-next"
 maintainer="Kai Stian Olstad <void@olstad.com>"
@@ -11,7 +12,7 @@ license="MIT"
 homepage="https://github.com/bluetooth-devices/dbus-fast"
 changelog="https://github.com/bluetooth-devices/dbus-fast/raw/main/CHANGELOG.md"
 distfiles="${PYPI_SITE}/d/dbus-fast/dbus_fast-${version}.tar.gz"
-checksum=84b4ff23bcadfa794842e8d3eccb521907f7c6cb8d6534c895995840306512aa
+checksum=752f355c32e28468ba9f57b509e2694c4ba0d3d55ae6eb0035511c226438eb35
 make_check=no # no tests included
 
 post_install() {

From 505ca9d786b8d2e18ee0cf559fe555b274359676 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 12:03:51 -0400
Subject: [PATCH 08/13] python3-lxml: update to 6.0.0.

---
 srcpkgs/python3-lxml/template | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/srcpkgs/python3-lxml/template b/srcpkgs/python3-lxml/template
index 8fdf77220f3..9fe4b81cb75 100644
--- a/srcpkgs/python3-lxml/template
+++ b/srcpkgs/python3-lxml/template
@@ -1,6 +1,6 @@
 # Template file for 'python3-lxml'
 pkgname=python3-lxml
-version=5.4.0
+version=6.0.0
 revision=1
 build_style=python3-pep517
 make_build_args="-C--build-option=--with-cython"
@@ -14,7 +14,7 @@ license="BSD-3-Clause, custom:ElementTree"
 homepage="https://lxml.de/"
 changelog="https://raw.githubusercontent.com/lxml/lxml/master/CHANGES.txt"
 distfiles="https://github.com/lxml/lxml/archive/lxml-${version}.tar.gz"
-checksum=12ed971a99bd07977e236bf59314cfd53fbf5d59f39d4a13caad901c7fceb0a2
+checksum=5560ee7bd3bcea0e64221bbb23f4ee1d222296ef25ba217e327a5f1d963005d9
 
 do_check() {
 	make test

From fdfa01754b35e4d0722f693353cbb2a03420b229 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 12:07:00 -0400
Subject: [PATCH 09/13] python3-cypari2: update to 2.2.2.

---
 srcpkgs/python3-cypari2/template | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/srcpkgs/python3-cypari2/template b/srcpkgs/python3-cypari2/template
index f3bdbfddbae..dcb8d631c0c 100644
--- a/srcpkgs/python3-cypari2/template
+++ b/srcpkgs/python3-cypari2/template
@@ -1,6 +1,6 @@
 # Template file for 'python3-cypari2'
 pkgname=python3-cypari2
-version=2.2.1
+version=2.2.2
 revision=1
 build_style=python3-pep517
 hostmakedepends="python3-setuptools python3-wheel python3-Cython
@@ -14,7 +14,7 @@ license="GPL-2.0-or-later"
 homepage="https://github.com/sagemath/cypari2"
 changelog="https://github.com/sagemath/cypari2/releases"
 distfiles="https://github.com/sagemath/cypari2/archive/refs/tags/${version}.tar.gz"
-checksum=3bcadf6d3e49db7438eeae581db57ec465dcff90fc5177812716f1bfc86895d3
+checksum=d23c96e1e160e1c23a282d33c70e8facf352c437b6632e3eafcbc3c1d6d30a5d
 
 do_check() {
 	# Please do not disable this custom check;

From ec8ef9ed0e04bfdf4a4f08a73cefc0d4b8801e11 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 12:09:05 -0400
Subject: [PATCH 10/13] python3-fpylll: update to 0.6.4.

---
 srcpkgs/python3-fpylll/template | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

diff --git a/srcpkgs/python3-fpylll/template b/srcpkgs/python3-fpylll/template
index 015e06b20b2..0d5d8bb0e42 100644
--- a/srcpkgs/python3-fpylll/template
+++ b/srcpkgs/python3-fpylll/template
@@ -1,11 +1,12 @@
 # Template file for 'python3-fpylll'
 pkgname=python3-fpylll
-version=0.6.3
+version=0.6.4
 revision=1
 build_style=python3-pep517
 hostmakedepends="python3-setuptools python3-wheel python3-Cython
- python3-cysignals"
-makedepends="python3-devel gmp-devel mpfr-devel fplll-devel pari-devel"
+ python3-cysignals python3-numpy"
+makedepends="python3-devel gmp-devel mpfr-devel fplll-devel pari-devel
+ python3-numpy"
 depends="python3"
 checkdepends="python3-pytest python3-numpy"
 short_desc="Python wrapper to fplll (floating point lattice algorithms)"
@@ -14,4 +15,4 @@ license="GPL-2.0-or-later"
 homepage="https://github.com/fplll/fpylll"
 changelog="https://github.com/fplll/fpylll/releases"
 distfiles="https://github.com/fplll/fpylll/releases/download/${version}/fpylll-${version}.tar.gz"
-checksum=a3f4049e1c27b52136f71f722312c4265e3a2dcb5722536ec8247d708dd4248a
+checksum=711d60d8ada46a410932cc45587728b4c7f4ea38a9b8d0be061f5ce098632ecd

From fbb400bec13678e0db2dbb26e1d5570e30cae59a Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 14:08:25 -0400
Subject: [PATCH 11/13] libplist: fix build with Cython 3.1

---
 srcpkgs/libplist/patches/cython-3.1.patch | 22 ++++++++++++++++++++++
 srcpkgs/libplist/template                 |  2 +-
 2 files changed, 23 insertions(+), 1 deletion(-)
 create mode 100644 srcpkgs/libplist/patches/cython-3.1.patch

diff --git a/srcpkgs/libplist/patches/cython-3.1.patch b/srcpkgs/libplist/patches/cython-3.1.patch
new file mode 100644
index 00000000000..81752deb3f4
--- /dev/null
+++ b/srcpkgs/libplist/patches/cython-3.1.patch
@@ -0,0 +1,22 @@
+From d7fe479707af57aeedf7e41c08e7fb698cd2e2a3 Mon Sep 17 00:00:00 2001
+From: Nikias Bassen <nikias@gmx.li>
+Date: Tue, 13 May 2025 18:32:50 +0200
+Subject: [PATCH] cython: Fix build with cython 3.1+
+
+---
+ cython/plist.pyx | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/cython/plist.pyx b/cython/plist.pyx
+index b5f4ef67..4d1f8aae 100644
+--- a/cython/plist.pyx
++++ b/cython/plist.pyx
+@@ -851,7 +851,7 @@ cdef plist_t native_to_plist_t(object native):
+         return plist_new_string(native)
+     if isinstance(native, bool):
+         return plist_new_bool(<bint>native)
+-    if isinstance(native, int) or isinstance(native, long):
++    if isinstance(native, int):
+         return plist_new_uint(native)
+     if isinstance(native, float):
+         return plist_new_real(native)
diff --git a/srcpkgs/libplist/template b/srcpkgs/libplist/template
index cc04ce12370..12c8423fa9f 100644
--- a/srcpkgs/libplist/template
+++ b/srcpkgs/libplist/template
@@ -1,7 +1,7 @@
 # Template file for 'libplist'
 pkgname=libplist
 version=2.2.0
-revision=5
+revision=6
 build_style=gnu-configure
 configure_args="--disable-static"
 hostmakedepends="automake libtool pkgconf python3 python3-Cython"

From a2513f1a2058094948d20e2aab2b2a2c5257eb90 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 14:19:00 -0400
Subject: [PATCH 12/13] python3-PyOpenGL-accelerate: fix build with Cython 3.1

---
 .../patches/cython-3.1.patch                  | 20 +++++++++++++++++++
 srcpkgs/python3-PyOpenGL-accelerate/template  |  2 +-
 2 files changed, 21 insertions(+), 1 deletion(-)
 create mode 100644 srcpkgs/python3-PyOpenGL-accelerate/patches/cython-3.1.patch

diff --git a/srcpkgs/python3-PyOpenGL-accelerate/patches/cython-3.1.patch b/srcpkgs/python3-PyOpenGL-accelerate/patches/cython-3.1.patch
new file mode 100644
index 00000000000..23ee8a63d30
--- /dev/null
+++ b/srcpkgs/python3-PyOpenGL-accelerate/patches/cython-3.1.patch
@@ -0,0 +1,20 @@
+--- a/src/vbo.pyx
++++ b/src/vbo.pyx
+@@ -188,7 +188,7 @@
+         assert not self.created, """Already created the buffer"""
+         buffers = self.get_implementation().glGenBuffers(1)
+         try:
+-            self.buffer = long( buffers )
++            self.buffer = int( buffers )
+         except (TypeError,ValueError) as err:
+             self.buffer = buffers[0]
+         self.target = self.c_resolve( self.target_spec )
+@@ -242,7 +242,7 @@
+         """Add an integer to this VBO (offset)"""
+         if hasattr( other, 'offset' ):
+             other = other.offset
+-        assert isinstance( other, (int,long) ), """Only know how to add integer/long offsets"""
++        assert isinstance( other, (int) ), """Only know how to add integer offsets"""
+         return VBOOffset( self, other )
+     cdef int check_live( self ):
+         if self.data is _NULL:
diff --git a/srcpkgs/python3-PyOpenGL-accelerate/template b/srcpkgs/python3-PyOpenGL-accelerate/template
index f4c5738f100..f664e71b40c 100644
--- a/srcpkgs/python3-PyOpenGL-accelerate/template
+++ b/srcpkgs/python3-PyOpenGL-accelerate/template
@@ -1,7 +1,7 @@
 # Template file for 'python3-PyOpenGL-accelerate'
 pkgname=python3-PyOpenGL-accelerate
 version=3.1.9
-revision=1
+revision=2
 build_style=python3-module
 hostmakedepends="python3-setuptools python3-Cython"
 makedepends="python3-devel"

From 0974e6196540840877721f8ef16b00202e4164f7 Mon Sep 17 00:00:00 2001
From: "Andrew J. Hesford" <ajh@sideband.org>
Date: Mon, 28 Jul 2025 16:42:32 -0400
Subject: [PATCH 13/13] urh: fix build with Cython 3.1

---
 srcpkgs/urh/patches/cython-3.1.patch | 20 ++++++++++++++++++++
 srcpkgs/urh/template                 |  2 +-
 2 files changed, 21 insertions(+), 1 deletion(-)
 create mode 100644 srcpkgs/urh/patches/cython-3.1.patch

diff --git a/srcpkgs/urh/patches/cython-3.1.patch b/srcpkgs/urh/patches/cython-3.1.patch
new file mode 100644
index 00000000000..c8ecb5b6018
--- /dev/null
+++ b/srcpkgs/urh/patches/cython-3.1.patch
@@ -0,0 +1,20 @@
+--- a/src/urh/dev/native/lib/chackrf.pxd
++++ b/src/urh/dev/native/lib/chackrf.pxd
+@@ -54,7 +54,7 @@
+         uint32_t part_id[2]
+         uint32_t serial_no[4]
+ 
+-    ctypedef struct hackrf_device_list:
++    ctypedef struct c_hackrf_device_list "hackrf_device_list":
+         char ** serial_numbers
+         hackrf_usb_board_id * usb_board_ids
+         int *usb_device_index
+@@ -63,7 +63,7 @@
+         void ** usb_devices
+         int usb_devicecount
+ 
+-    ctypedef hackrf_device_list hackrf_device_list_t;
++    ctypedef c_hackrf_device_list hackrf_device_list_t;
+ 
+     ctypedef int (*hackrf_sample_block_cb_fn)(hackrf_transfer* transfer)
+ 
diff --git a/srcpkgs/urh/template b/srcpkgs/urh/template
index 64c93f19ccc..f4a5d98cc9d 100644
--- a/srcpkgs/urh/template
+++ b/srcpkgs/urh/template
@@ -1,7 +1,7 @@
 # Template file for 'urh'
 pkgname=urh
 version=2.9.8
-revision=1
+revision=2
 build_style=python3-module
 hostmakedepends="python3-setuptools python3-Cython python3-numpy"
 makedepends="python3-devel python3-PyQt5 libairspy-devel librtlsdr-devel